Publications

Research at the intersection of AI and healthcare — from natural language processing to computer vision reproducibility.

Google Scholar ↗Semantic Scholar ↗

2026

1 paper
JMIR

Enhancing Healthcare Interoperability Using Large Language Models: A Generative Proof-of-Concept Framework to Extract Medical Information from Unstructured Clinical Text

Bahadır Eryılmaz, Kamyar Arzideh, Mikel Bahn, Hendrik Damm, Sina Warmer, Henning Schäfer, Ahmad Idrissi-Yaghir, Tabea Margareta Grace Pakull, Lea Jessica Albrecht, Jens Kleesiek, Georg Lodde, Christoph M. Friedrich, Elisabeth Livingstone, Dirk Schadendorf, Katarzyna Borys, Felix Nensa, René Hosch

JMIR (Preprint)

LLMsFHIRHealthcare NLP|JMIR ↗

2025

4 papers
JCO CCI

Automated Tumor International Classification of Diseases Coding of Real-World Pathology Reports Using Self-Hosted Large Language Models

Kamyar Arzideh, René Hosch, Amin Turki, Bahadır Eryılmaz, Mikel Bahn, Henning Schäfer, Ahmad Idrissi-Yaghir, Sameh Khattab, Amin Dada, Hideo A. Baba, Dirk Schadendorf, Martin Schuler, Jens Kleesiek, Sylvia Hartmann, Felix Nensa, Julius Keyl

JCO Clinical Cancer Informatics

LLMsPathologyICD Coding|DOI ↗
CLEF

Overview of ImageCLEFmedical 2025 – Medical Concept Detection and Interpretable Caption Generation

Hendrik Damm, Tabea M. G. Pakull, Helmut Becker, Benjamin Bracke, Bahadır Eryılmaz, Louise Bloch, Raphael Brüngel, Cennet Selin Schmidt, Johannes Rückert, Obioma Pelka, Henning Schäfer, Ahmad Idrissi-Yaghir, Asma Ben Abacha, Alba García Seco de Herrera, Henning Müller, Christoph M. Friedrich

CLEF 2025

Medical ImagingCaption GenerationImageCLEF
JMIR

Using a Diverse Test Suite to Assess Large Language Models on Fast Health Care Interoperability Resources Knowledge: Comparative Analysis

Ahmad Idrissi-Yaghir, Kamyar Arzideh, Henning Schäfer, Bahadır Eryılmaz, Micha Bahn, Yutong Wen, Katarzyna Borys, Eva Hartmann, Cennet Selin Schmidt, Obioma Pelka, Johannes Haubold, Christoph M. Friedrich, Felix Nensa, René Hosch

Journal of Medical Internet Research

LLMsFHIRHealthcare NLP|JMIR ↗
CLEF

Overview of ImageCLEF 2025: Multimedia Retrieval in Medical, Social Media and Content Recommendation Applications

Bogdan Ionescu, Henning Müller, Dan-Cristian Stanciu, Alexandra-Georgiana Andrei, Ahmedkhan Radzhabov, Yuri Prokopchuk, Liviu-Daniel Ștefan, Mihai Constantin, Mihai Dogariu, Vassili Kovalev, Hendrik Damm, Johannes Rückert, Asma Ben Abacha, Alba García Seco de Herrera, Christoph M. Friedrich, Louise Bloch, Raphael Brüngel, Ahmad Idrissi-Yaghir, Henning Schäfer, Cennet Selin Schmidt, Tabea M. G. Pakull, Benjamin Bracke, Obioma Pelka, Bahadır Eryılmaz, Helmut Becker, and others

CLEF 2025

Multimedia RetrievalMedical ImagingImageCLEF|DOI ↗

2024

3 papers
Preprint

MIRACLE – Medical Information Retrieval using Clinical Language Embeddings for Retrieval Augmented Generation at the Point of Care

Kamyar Arzideh, Henning Schäfer, Ahmad Idrissi-Yaghir, Bahadır Eryılmaz, Mikel Bahn, Cynthia Sabrina Schmidt, Olivia Barbara Pollok, Eva Hartmann, Philipp Winnekens, Katarzyna Borys, Johannes Haubold, Felix Nensa, René Hosch

Research Square Preprint

Information RetrievalRAGClinical NLP|DOI ↗
ACLWorkshop

WisPerMed at 'Discharge Me!': Advancing Text Generation in Healthcare with Large Language Models, Dynamic Expert Selection, and Priming Techniques on MIMIC-IV

Hendrik Damm, Tabea M. G. Pakull, Bahadır Eryılmaz, Helmut Becker, Ahmad Idrissi-Yaghir, Henning Schäfer, Sergej Schultenkämper, Christoph M. Friedrich

BioNLP Workshop, ACL 2024

LLMsText GenerationClinical NLP|ACL Anthology ↗arXiv ↗
IEEEConference

Investigating the Impact of Randomness on Reproducibility in Computer Vision: A Study on Applications in Civil Engineering and Medicine

Bahadır Eryılmaz, Osman Alperen Koraş, Jörg Schlötterer, Christin Seifert

IEEE CogMI 2024

Computer VisionReproducibilityResearch Methods|IEEE ↗arXiv ↗

2023

1 paper
Workshop

Patient Trajectory Visualization for FHIR Healthcare Data: A Use Case on Melanoma Patients

Meijie Li, Wolfgang Galetzka, Bahadır Eryılmaz, Georg Lodde, Elisabeth Livingstone, Jörg Schlötterer, Christin Seifert

LWDA 2023

Patient TrajectoriesFHIRVisualization